David O. Nelson

All Publications

Reynolds P, Goldberg D, Hurley S, Nelson DO, Largent J, Henderson KD, Bernstein L. Passive smoking and risk of breast cancer in the California Teachers Study. Cancer Epi Biomarkers & Prev. 2009;18(12);3389-98.

Jones IM, Burkhart-Schultx K, Strout CL, Nelson DO. Studies of thioguanine-resistant lymphocytes induced by in vivo irradiation of mice.  Environ Mol Mutagen. 2008;49(5):343-50.

Bogen KT, Keating GA 2nd, Chan JM, Paine LJ, Simms EL, Nelson DO, Holly EA. Highly elevated PSA and dietary PhIP intake in a prospective clinic-based study among African Americans. Prostate Cancer Prostatic Dis. 2007;10(3):261-9. 

Jones IM, Thomas CB, Xi T, Mohrenweiser HW, Nelson DO. Exploration of methods to identify polymorphisms associated with variation in DNA repair capacity phenotypes. Mutat Res. 2007;616(1-2):213-20. 

Malfatti MA, Dingley KH, Nowell-Kadlubar S, Ubick EA, Mulakken N, Nelson D, Lang NP, Felton JS, Turteltaub KW.  The urinary metabolite profile of the dietary carcinogen 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine is predictive of colon DNA adducts after a low-dose exposure in humans.  Cancer Res. 2006;66(21):10541-7.

Berman ES, Kulp KS, Knize MG, Wu L, Nelson EJ, Nelson DO, Wu KJ. Distinguishing monosaccaride stereo- and structural isomers with ToF-SIMS and multivariate statistical analysis.  Analytical Chemistry. 2006;78(18):6497-6503.

Kulp KS, Montgomery JL, Nelson DO, McLimans B, Latham ER, Shattuck DL, Klotz DM, Bennett LM. Essiac and Flor-Essence herbal tonics stimulate the in vitro growth of human breast cancer cells.  Breast Cancer Research and Treatment. 2006;98(3):249-259. 

Jones IM, Thomas CB, Xi T, Nelson DO, Mohrenweiser HW. The genetic basis for variation in radiation sensitivity in the general population.  Radiat Res. 2005;163(6):700-1. 

Fodor K, Nelson DO, Alegria-Hartman M, Robbins K, Langlois RG, Turteltaub KW, McCutchen-Maloney SL. Statistical challenges in the analysis of two-dimensional difference gel electrophoresis experiments using DeCyder. Bioinformatics. 2005;21(19):3733-3740. 

Coleman MA, Yin E, Peterson LE, Nelson D, Sorenson K, Tucker JD, Wyrobek AJ. Low-dose irradiation alters the transcript profiles of human lymphoblastoid cells including genes associated with cytogenic radioadaptive response.  Radiation Research. 2005;164(4);369-82. 

Chiarappa-Zucca M, Finkel R, Martinelli R, McAninch J, Nelson D, Turteltaub K. Measurement of beryllium in biological samples by accelerator mass spectrometry: Applications for studying chronic beryllium disease. Chem Res Toxicol. 2004;17(12):1614-1620. 

Motin V, Georgescu A, Fitch J, Gu P, Nelson D, Mabery S, Garnham J, Sokhansanj B, Ott L, Coleman M, Elliott J, Kegelmeyer L, Wyrobek A, Slezak T, Brubaker R, Garcia E. Temporal global changes in gene expression during temperature transition in yersinia pestis.  J Bacteriol. 2004;186(18):6298-305. 

Tomascik-Cheeseman L, Coleman M, Marchetti F, Nelson D, Kegelmeyer L, Nath J, Wyrobek A. Differential basal expression of genes associated with stress response, damage control, and dna repair among mouse tissues. Mutat Res. 2004;561(1-2):1-14. 

Nelson DO and Fridlyand J. Designing meaningful measures of read length for data produced by DNA sequencers. In D. R. Goldstein and S. Dudoit, editors, Science and Statistics: a Festscrift for Terry Speed, volume 41 of Lecture Notes|Monograph Series. Institute for Mathematical Statistics, 2003.

Yin E, Nelson D, Coleman M, Peterson L, Wyrobek A. Gene expression changes in mouse brain after exposure to low-dose ionizing radiation.  Int J Radiat Biol. 2003;79(10):759-75. 

Thomas C, Nelson D, Pleshanov P, Jones I. Induction and decline of hprt mutants and deletions following a low dose radiation exposure at chernobyl.  Mutat Res. 2002;499(2):177-87. 

Jones IM, Galick H, Kato P, Langlois R, Mendelsohn M, Murphy G, Pleshanov P, Ramsey M, Thomas C, Tucker J, Tureva L, Vorobtsova I, Nelson D. Three somatic genetic biomarkers and covariates in radiation-exposed Russian cleanup workers of the Chernobyl nuclear reactor 6-13 years after exposure. Radiat Res. 2002;158(4):424-42. 

Lowe X, Eskenazi B, Nelson D, Kidd S, Alme A, Wyrobek A. Frequency of xy sperm increases with age in fathers of boys with klinefelter syndrome.  Am J Hum Genet. 2001;69(5):1046-54. 

Jones IM Tucker J, Langlois R, Mendelsohn M, Pleshanov P, Nelson DO. Evaluation of three somatic genetic biomarkers as indicators of low dose radiation effects in clean-up workers of the chernobyl nuclear reactor accident. Radiat Prot Dosimetry. 2001;97(1):61-7. 

Pluth J, Nelson D, Ramsey M, Tucker J. The relationship between genotype and chromosome aberration frequencies in a normal adult population. Pharmacogenetics. 2000;10(4):311-9. 

Salmon C, Knize M, Panteleakos F, Wu R, Nelson D, Felton J. Minimization of heterocyclic amines and thermal inactivation of escherichia coli in fried ground beef. J Natl Cancer Inst. 2000;92(21):1773-8. 

Spruill M, Nelson D, Ramsey M, Nath J, Tucker J. Lifetime persistence and clonality of chromosome aberrations in the peripheral blood of mice acutely exposed to ionizing radiation. Radiat Res. 2000;153(1):110-21. 

Sorensen K, Zetterberg L, Nelson D, Grawe J, Tucker J. The in vivo dose rate e_ect of chronic gamma radiation in mice: translocation and micronucleus analyses. Mutat Res. 2000;457(1-2):125-36. 

Thomas C, Nelson D, Pleshanov P, Vorobstova I, Tureva L, Jensen R, Jones I. Elevated frequencies of hypoxanthine phosphoribosyltransferase lymphocyte mutants are detected in russian liquidators 6 to 10 years after exposure to radiation from the chernobyl nuclear power plant accident. Mutat Res. 1999;439(1):105-19. 

Mani C, Freeman S, Nelson DO, Vogel JS, Turteltaub KW. Species and strain comparisons in the macromolecular binding of extremely low doses of [14c]benzene in rodents, using accelerator mass spectrometry. Toxicology and Applied Pharmacology. 1999;159:83-90. 

Jones IM, Thomas C, Haag K, Pleshanov P, Vorobstova I, Tureva L, Nelson D. Total gene deletions and mutant frequency of the hprt gene as indicators of radiation exposure in chernobyl liquidators. Mutat Res. 1999;431(2):233-46. 

Tucker J, Sorensen K, Chu C, Nelson D, Ramsey M, Urlando C, Heddle J. The accumulation of chromosome aberrations and dlb-1 mutations in mice with highly fractionated exposure to gamma radiation. Mutat Res. 1998;400(1-2):321-335. 

Matsumoto K, Ramsey M, Nelson D, Tucker J. Persistence of radiation-induced translocations in human peripheral blood determined by chromosome painting. Radiat Res. 1998;149(6):602-13. 

Dingley K, Freeman S, Nelson D, Garner R, Turteltaub K. Covalent binding of 2-amino 3,8-dimethylimidazo[4,5-f]quinoxaline to albumin and hemoglobin at environmentally relevant doses. comparison of human subjects and f344 rats. Drug Metab Dispos. 1998;26(8):825-8. 

Nelson D, Speed T, Yu B. The limits of random fingerprinting. Genomics. 1997;40(1):1-12. 

Nelson DO and Speed TP. Recovering DNA sequences from electrophoresis data. In L. Shepp and S. Levinson, editors, Image Models and Their Speech Model Cousins. Springer, New York, 1996.

Nelson DO and Speed TP. Improving DNA sequencing accuracy and throughput. In T. P. Speed and M. S. Waterman, editors, Genetic Mapping and DNA Sequencing. Springer, New York, 1996.

Reynolds P, Smith D, Satariano E, Nelson D, Goldman L, Neutra R. The four county study of childhood cancer: clusters in context. Stat Med. 1996;15(7-9):683-97. 

Balch JW, Davidson C, Brewer L, Kimbrough J, Swierkowsk Si, Koo J, Nelson DO, Tibbetts C, McCready P, Bruce L, Mariella R, Carrano AV. High speed DNA sequencing in arrays of glass microchannels. Microbial and Comparative Genomics. 1996;1:224.

Arcot S, Shaikh T, Kim J, Bennett L, Alegria-Hartman M, Nelson D, Deininger P, Batzer M. Sequence diversity and chromosomal distribution of young" alu repeats. Gene. 1995;163(2):273-8. 

Gordon L, Bergmann A, Christensen M, Danganan L, Lee D, Ashworth L, Nelson D, Olsen A, Mohrenweiser H, Carrano A. A 30-mb metric fluorescence in situ hybridization map of human chromosome 19q. Genomics. 1994;30(2):187-94. 

Nelson D and Speed T. Predicting progress in directed mapping projects. Genomics. 1994;24(1):41-52. 

Nelson DO and Speed TP. Statistical and computational challenges in physical mapping. Computing Science and Statistics. 1994;26:507-514.

Nelson DO and Speed TP. Statistical issues in constructing high-resolution physical maps. Statistical Science. 1994;96:334-354.

Brandriff B, Gordon L, Fertitta A, Olsen A, Christensen M, Ashworth L, Nelson D, Carrano A, Mohrenweiser H. Human chromosome 19p: a fluorescence in situ hybridization map with genomic distance estimates for 79 intervals spanning 20 mb. Genomics. 1994;23(3):582-91. 

Olsen A, Teglund S, Nelson D, Gordon L, Copeland A, Georgescu A, Carrano A. Gene organization of the Pregnancy-Specific Glycoprotein region on chromosome 19: assembly and analysis of a 700-kb cosmid contig spanning the region. Genomics. 1994;23:659-668.

Nelson DO, Reynolds P, Satariano E, Smith DF. Use of the parametric bootstrap to assess the observed vs. expected geographic distribution of rare events in a study of childhood cancer. American Journal of Epidemiology. 1992;136:989.